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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs1478044 chr8:13988955 A/G BIN3 chr8:22477931-22526661:- 0.79 6.57 1.66E-10 Box Plot
BLCA rs1478044 chr8:13988955 A/G CCDC25 chr8:27590828-27630170:- 0.91 6.77 4.79E-11 Box Plot
BLCA rs1478044 chr8:13988955 A/G CHMP7 chr8:23101150-23119513:+ 0.8 6.35 6.28E-10 Box Plot
BLCA rs1478044 chr8:13988955 A/G CNOT7 chr8:17082473-17104387:- 1.01 7.92 2.67E-14 Box Plot
BLCA rs1478044 chr8:13988955 A/G DCTN6 chr8:30013813-30041156:+ 0.82 6.18 1.68E-9 Box Plot
BLCA rs1478044 chr8:13988955 A/G ELP3 chr8:27947190-28048673:+ 0.89 6.47 3.08E-10 Box Plot
BLCA rs1478044 chr8:13988955 A/G FAM160B2 chr8:21946670-21962409:+ 0.82 7.33 1.34E-12 Box Plot
BLCA rs1478044 chr8:13988955 A/G INTS10 chr8:19674651-19709594:+ 0.91 7.22 2.77E-12 Box Plot
BLCA rs1478044 chr8:13988955 A/G KIAA1967 chr8:22462257-22477981:+ 0.97 7.42 7.8E-13 Box Plot
BLCA rs1478044 chr8:13988955 A/G LEPROTL1 chr8:29952914-30034724:+ 0.85 6.12 2.29E-9 Box Plot
BLCA rs1478044 chr8:13988955 A/G MCPH1 chr8:6264113-6506025:+ 0.82 6.08 2.96E-9 Box Plot
BLCA rs1478044 chr8:13988955 A/G MTMR9 chr8:11141925-11185655:+ 0.76 6.28 9.24E-10 Box Plot
BLCA rs1478044 chr8:13988955 A/G PCM1 chr8:17780349-17887453:+ 0.75 6.14 2.02E-9 Box Plot
BLCA rs1478044 chr8:13988955 A/G POLR3D chr8:22102617-22112113:+ 0.92 7.46 5.74E-13 Box Plot
BLCA rs1478044 chr8:13988955 A/G R3HCC1 chr8:23127633-23153792:+ 0.75 6.28 9.41E-10 Box Plot